Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888209.1_cds_XP_016442760.1_37988
CDS Infomation

[gene=LOC107768170] [db_xref=GeneID:107768170] [protein=putative late blight resistance protein homolog R1C-3] [protein_id=XP_016442760.1] [location=95537..97078] [gbkey=CDS]
Sequence

ATGGAGATTGTTGAGACATGTGGAAAAGGGACTCTTTCTTCTGCAGAGCCTTCCACCAAA
CGTAGTTTTCCATCAACTGATGATGAAGTTGTGGGCTTTGTGAAAGATGCAGAAAGTATA
ATGAAGAAATTAACCGGTGGAGCAAAGGAGCTAGACGTTATCTCAATCTTTGGAATGCCA
GGTCTTGGAAAAACAACTTTGGCCAGGAAAGTGTACGACAATCCTTCTATAGTTAATTAC
TTTGATGTTAAAGCTTGGTGTTCTGTTTCGCAAGCGCATAATAGGAGGACATTGTTGATT
GAGATTTTCAAGCAAGCAACACGTGATAAGAGCGAAATCGATGAGGCTGTTGACATAGCT
GACAAGTTGCAGAAGACTCTTAAAGGCAGGAGATATCTCATAGTATTAGATGATATATGG
GAAGTCGAGACATGGGAAGATCTGGGATTGTGTTTCCCTAAAGGTGAAGATGGAAGCAGA
GTAATTGTAACAACTCGAATTGAAGAAGTGGCTAAGCATCTTCAGCACTGCAGTGATCCT
TATTCTCTTAGATTTCTGACATCGAAAGAGAGTTGGGAATTATTGCAGAAGAAAGTATTT
CGAGGAGAGAGTTGTCCACCCGATCTACTGGAAGCAGGGTTACATGTTGCGGAACATTGT
AAGGGGTTGCCTCTTGTGATTGTACTGATTGCTGGAATTATTGTGAAAATGGAAAGGAAG
GCGTCCTTGTGGCTGGAGGTTGCTAATGACTTAAGTTCCCTTGCTTTAGGAGAGCAGGGT
ATGAAGGTAATACAATCGAGTTACGACCAGTTAGAAGACCAATTAAAGCCTTGTCTTCTG
TACATGGCATTGTATCCAGAAGACTATAAGATTCCAGTGTCTGATTTACTTAAGTTGTGG
ATGGCTGAAGAGTTCGTAGAGAATATTGACTCAGAGAATATGGAGGAAACATCTAGAATT
TTGTTGAATGATCTACTTAAGAGAAGCCTAGTGATGGTCTCTGGCCGACAGGAAATTAAT
GGTGCCATAGAATACTGCTCACTTCATGATTTAGTGCGTGAGTTTTGTTTGAGAAGACTT
ACAGAAGAAAAGTACTTTATGCAGCTGACAGTGCCATACAGTTCAAATCAACAATTGTAT
TCCAAAGAATCACGGTTATGCATTTATATTCATGATGAACTTGTTAAACAATTAGATCAT
TATGAATATCGATTGGATAAGATTCCAATGTTCGAGTCCAAGCAGTTAGATTGTTATGAA
TATCATTTGGACAACATTCCAATGGTCAAGTCCAAGGAAACAAAGCGCTCTGGTCAATGT
CCAAAGGTTTTTCAGTTCATTGCTCATCCAAAATCCAACATATGGAACCGATCAGATTCT
TTGCATTCACCTGTTAAACTAAGATTTGTTCAGGCATTGCATTTGAATGAAAGGGAATTA
CCAAGTTCCTGGATTACGGCAGTACAATCACTATCTCACTTGAGGTACCTTGCAATTTGT
GTCGAAAAATTTGATTTCAAGTGGGTATCACATCTACTCTAG

Peptide Sequence

PEP ID

XP_016442760.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1C-3 [Nicotiana tabacum]
Sequence

MEIVETCGKGTLSSAEPSTKRSFPSTDDEVVGFVKDAESIMKKLTGGAKELDVISIFGMP
GLGKTTLARKVYDNPSIVNYFDVKAWCSVSQAHNRRTLLIEIFKQATRDKSEIDEAVDIA
DKLQKTLKGRRYLIVLDDIWEVETWEDLGLCFPKGEDGSRVIVTTRIEEVAKHLQHCSDP
YSLRFLTSKESWELLQKKVFRGESCPPDLLEAGLHVAEHCKGLPLVIVLIAGIIVKMERK
ASLWLEVANDLSSLALGEQGMKVIQSSYDQLEDQLKPCLLYMALYPEDYKIPVSDLLKLW
MAEEFVENIDSENMEETSRILLNDLLKRSLVMVSGRQEINGAIEYCSLHDLVREFCLRRL
TEEKYFMQLTVPYSSNQQLYSKESRLCIYIHDELVKQLDHYEYRLDKIPMFESKQLDCYE
YHLDNIPMVKSKETKRSGQCPKVFQFIAHPKSNIWNRSDSLHSPVKLRFVQALHLNEREL
PSSWITAVQSLSHLRYLAICVEKFDFKWVSHLL

Transcript Sequence

Gene sequence data has not been registered.